PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010095090.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 77aa    MW: 8745.73 Da    PI: 7.0963
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010095090.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2163.4e-052244123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C+++  ++++L++H ++H
  XP_010095090.1 22 YPCSLCNRVAHTQEQLVKHRKKH 44
                    99********************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576679.13E-82168No hitNo description
SMARTSM003550.00592244IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.3672249IPR007087Zinc finger, C2H2
PfamPF138942.7E-42245No hitNo description
SMARTSM003552305076IPR015880Zinc finger, C2H2-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 77 aa     Download sequence    Send to blast
MSDDESVSSS SSEDGDEAMD RYPCSLCNRV AHTQEQLVKH RKKHHNKKKT NCSLCGMKFK  60
EKAVFDAHDC LTFDTHA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010095090.13e-51hypothetical protein L484_026399
TrEMBLW9QYB03e-51W9QYB0_9R